2022/03/14 Mon
note
18:30- Guest Lecture: DIY lab building Urs Gaudenz
〜Hacking Microscopes〜
DIY Generic Lab Equipment is a tool for engineers and researchers to learn together.
A centrifuge needs a sturdy case like a hard disk drive because it is deathly dangerous if it fly off.
*enacting science
In the project they did in Slovenia(?) last year, they were also building a Fluorescence Microscope.
“A Lab is a place to labor, experiment, research and share”
〜Hacking PCR〜
The interesting thing about thermocyclers is that simple devices that raise and lower temperatures play a very important role in biology.
Both ninjaPCR and pocketPCR were created in the community based on openPCR.
// looks like evolution.
DIY Mobile Gen Lab → BentoLab
〜Hacking Sequencer〜
Professional sequencers are deathly expensive, but they change generations quickly, so even if the new equipment performs very well, it is often the case that the loan on the old machine has not yet been paid off.
Reverse engineering of sequencers
ref
GaudiLabs
http://www.gaudi.ch/GaudiLabs/?page_id=2
A gene gun prototype made from wood and a bicycle pump by Rüdiger Trojok
https://www.flickr.com/photos/medicalmuseion/8432825660
Webcam Microscope Stage
https://www.thingiverse.com/thing:277476
Yashas Shetty (one of the founder of Hackteria)
https://en.wikipedia.org/wiki/Yashas_Shetty
Community Microscope Kit
https://publiclab.org/wiki/micro
UROŠ - Ubiquitous Rural Open Science Hardware
https://www.hackteria.org/wiki/UROS
sachiko hirosue
http://biopoiesis.org/
NinjaPCR
https://github.com/hisashin/NinjaPCR
Mobile Labs Hackathon, Ljubljana
https://www.hackteria.org/wiki/Mobile_Labs_Hackathon,_Ljubljana
PySeq2500
https://github.com/nygctech/PySeq2500
Illumina HiSeq 2500 Sequencing System
https://www.labmakelaar.com/product/illumina-hiseq-2500-sequencing-system-with-cbot-flow-cell-prep-system/
21:30 - Waagのファブ施設見学（Fab Academyが始まるので30分で中断）
22:00 - Workshop: Open source digital design Maarten Smith
https://github.com/BioHackAcademy/BHA_SterileHood
ターミナルで↑をクローン
BOMの説明
fritzingの説明
KiCadの説明
Georg “KiCad just moved to v6.0 recently, no more reason to use Eagle.”
Inkscapeの説明
OpenSCAD/FreeCAD/SketchUp/Fusion360/blender
Native formats:
- AutoCAD (.dwg)
- CATIA V4 (.model)
- CATIA V5, V6 (CATPart, CATProduct, CGR)
- Creo .prt, (.asm)
- NX, Unigraphics (.prt, .jt, .j_t)
- Pro/E (.prt, .asm)
- Inventor (ipt, iam)
- MicroStation (dgm)
- SolidWorks (.sldprt, .sldasm)
- Solid Edge (.par, .asm, .psm)
Neutral formats:
- STEP (.stp, .step)
- STL (.stl)
- IGES (.igs, .iges)
- 3D PDF (.pdf)
- Parasolid (.x_t, .x_b)
- VRML (.vrml)
- X3D (.x3d)
- COLLADA (.dae)
- DXF (.dxf)
cf paperfuge
https://www.wired.com/2017/01/paperfuge-20-cent-device-transform-health-care/
Fusionのパラメーターの使いかた
Fusionのパターンの使いかた
ref
kicad
https://www.kicad.org/
Thingiverse
https://www.thingiverse.com/